Effects of aluminium on the mineralization of dissolved organic carbon derived from forest floors

Aluminium (Al) is abundant in soils, but the influence of Al on the mineralization of dissolved organic carbon and thus on carbon sequestration in soil is only poorly understood. We investigated the extent and rate of mineralization of dissolved organic carbon at various Al/C ratios. Dissolved organic carbon extracted from Oi and Oa layers under coniferous and deciduous forest was incubated with initial molar Al/C ratios from < 0.004 to 0.44 for 130 days. Mineralization was quantified by measurement of CO₂. Rapidly and slowly mineralizable pools of dissolved organic C and their decomposition rate constants and half‐lives (as a measure of labile and stable C) were modelled with a double exponential equation. Increasing initial Al/C ratios up to 0.1 led to a considerable decrease in mineralization (up to 50% compared with control samples). The half‐life of the stable C pool increased up to 4‐fold, whereas the half‐life of the labile C pool was unaffected. Ratios of Al/C > 0.1 did not further decrease the mineralization, but led to increasing concentrations of free Al³⁺ in solution, and to increasing Al/C ratios in the precipitate, indicating that the Al complexation capacity of dissolved organic C was exceeded. Decrease in mineralization as well as formation of particulate organic matter (up to 56% of initial dissolved organic C) affected mainly the stable pool. Mineralization of dissolved organic C can be predicted from UV absorption by use of exponential regressions, but adding an Al variable did not improve the prediction significantly. We conclude that Al influences substantially the biodegradability of dissolved organic C percolating into the mineral soil, which may have consequences for the carbon sequestration in the soil. Declining Al concentrations would increase the mineralization of dissolved organic C only if the Al/C ratio becomes less than the ‘threshold value’ in the range of the Al complexation capacity of the dissolved organic C.     

Lignin degradation controls the production of dissolved organic matter in decomposing foliar litter

Lignin is considered to be a crucial component controlling litter decomposition but its role in the production of dissolved organic matter (DOM) from litter is not well understood. Our main objective therefore was to examine the amounts and properties of DOM produced in decomposing litter, with special emphasis on the role of lignin degradation. We exposed litter of five different tree species (Sycamore maple, Mountain ash, European beech, Norway spruce, Scots pine) in litterbags at the soil surface of two neighbouring sites to degradation under field conditions. Litterbags were sampled eight times during 27 months of exposure in the field. We determined mass loss and characterized the lignin fraction by two different methods (van Soest procedure, acid‐detergent lignin: ADL, CuO oxidation). Litter was irrigated in the laboratory and leachates were analysed for dissolved organic carbon (DOC) and characterized by UV and fluorescence spectroscopy. Litter decomposition followed a two‐stage model characterized by initially rapid and then decreasing degradation with time. In the initial phase of litter decomposition, leached amounts of DOM decreased with time and no effects of lignin degradation were found. The contents of ADL in the litter residues and CuO oxidation products suggest larger degradation and oxidation of lignin in beech, spruce and pine litter than in maple and ash litter. The production of DOM from litter with larger lignin degradation increased in the second phase of decomposition, when mass loss exceeded 10–20%. In contrast, DOM produced from litter showing weak lignin degradation (maple, ash) did not increase further in the second phase of decomposition. In the leachates of litter with large lignin degradation (beech, spruce, pine), UV absorbance and fluorescence spectroscopy indicated a larger increase in the contribution of lignin‐derived compounds to DOM with increasing mass loss than for litter species with relatively stable lignin. We conclude that degradation of lignin is an important control on DOM production during the second phase of litter decomposition.     

Amounts and degradability of dissolved organic carbon from foliar litter at different decomposition stages

Litter is one of the main sources of dissolved organic carbon (DOC) in forest soils and litter decomposition is an important control of carbon storage and DOC dynamics. The aim of our study was to evaluate (i) effects of tree species on DOC production and (ii) relationships between litter decomposition and the amount and quality of DOC. Five different types of leaves and needles were exposed in litterbags at two neighboring forest sites. Within 12 months we sampled the litterbags five times and leached aliquots of field moist litter in the laboratory. In the collected litter percolates we measured DOC concentrations and recorded UV and fluorescence spectra in order to estimate the aromaticity and complexity of the organic molecules. Furthermore, we investigated the biodegradability of DOC from fresh and decomposed litter during 6 weeks incubations. Fresh sycamore maple litter released the largest amounts of DOC reaching about 6.2% of litter C after applying precipitation of 94 mm. We leached 3.9, 1.6, 1.0 and 3.3% carbon from fresh mountain ash, beech, spruce and pine litter, respectively. In the initial phase of litter decomposition significantly decreasing DOC amounts were released with increasing litter mass loss. However, after mass loss exceeds 20% DOC production from needle litter tended to increase. UV and fluorescence spectra of percolates from pine and spruce litter indicated an increasing degree of aromaticity and complexity with increasing mass loss as often described for decomposing litter. However, for deciduous litter the relationship was less obvious. We assume that during litter decomposition the source of produced DOC in coniferous litter tended toward a larger contribution from lignin-derived compounds. Biodegradability of DOC from fresh litter was very high, ranging from 30 to 95% mineralized C. DOC from degraded litter was on average 34% less mineralizable than DOC from fresh litter. Taking into account the large DOC production from decomposed needles we can assume there is an important role for DOC in the accumulation of organic matter in soils during litter decomposition particularly in coniferous forests.     

Validation of the Fluorescence Polarisation Assay (FPA) for the serological diagnosis of brucellosis

In order to evaluate suitability of Fluorescence Polarisation Assay (FPA) for serological Brucella diagnostic, 1739 samples of sera from cattle, pigs, sheep and goats (65 Brucella-positive, 960-negative and 714 false-positive sera) were investigated at a dilution of 1:10. The cut-off was adjusted by means of ROC analysis. Furthermore, the serum samples were examined for Brucella antibodies using SAT, CFT and ELISA and the results were evaluated regarding sensitivity and specificity. FPA, SAT, CFT and ELISA attained a sensitivity of 92.3, 98.5, 84.6 and 86.2%. In comparison, specificity varied with 87.8, 72.6, 92.5 and 85.8%, respectively. Accordingly, FPA is a suitable test for serodiagnosis of brucellosis.     

The use of sarmazenil in the treatment of a moxidectin intoxication in a foal

A13-day-old Arabian Thoroughbred filly weighing 40 kg (88 1b) was presented to the University of Zurich Equine Clinic with a history of depression after deworming with moxidectin at a dose of 2 mg/kg (recommended dose 0.4 mg/kg body weight)^a the day before admission. The foal was found recumbent 12 hours after drug administration and was in an unconscious state 6 hours later     

Metabolite profiling of wheat grains (Triticum aestivum L.) from organic and conventional agriculture

In some European community countries up to 8% of the agricultural area is managed organically. The aim was to obtain a metabolite profile for wheat (Triticum aestivum L.) grains grown under comparable organic and conventional conditions. These conditions cannot be found in plant material originating from different farms or from products purchased in supermarkets. Wheat grains from a long-term biodynamic, bioorganic, and conventional farming system from the harvest 2003 from Switzerland were analyzed. The presented data show that using a high throughput GC-MS technique, it was possible to determine relative levels of a set of 52 different metabolites including amino acids, organic acids, sugars, sugar alcohols, sugar phosphates, and nucleotides from wheat grains. Within the metabolites from all field trials, there was at the most a 50% reduction comparing highest and lowest mean values. The statistical analysis of the data shows that the metabolite status of the wheat grain from organic and mineralic farming did not differ in concentrations of 44 metabolites. This result indicates no impact or a small impact of the different farming systems. In consequence, we did not detect extreme differences in metabolite composition and quality of wheat grains.     

Molecular mimicry regulates ABA signaling by SnRK2 kinases and PP2C phosphatases

Abscisic acid (ABA) is an essential hormone for plants to survive environmental stresses. At the center of the ABA signaling network is a subfamily of type 2C protein phosphatases (PP2Cs), which form exclusive interactions with ABA receptors and subfamily 2 Snfl-related kinase (SnRK2s). Here, we report a SnRK2-PP2C complex structure, which reveals marked similarity in PP2C recognition by SnRK2 and ABA receptors. In the complex, the kinase activation loop docks into the active site of PP2C, while the conserved ABA-sensing tryptophan of PP2C inserts into the kinase catalytic cleft, thus mimicking receptor-PP2C interactions. These structural results provide a simple mechanism that directly couples ABA binding to SnRK2 kinase activation and highlight a new paradigm of kinase-phosphatase regulation through mutual packing of their catalytic sites.     

Stabilization mechanisms of organic matter in four temperate soils: Development and application of a conceptual model

Based on recent findings in the literature, we developed a process‐oriented conceptual model that integrates all three process groups of organic matter (OM) stabilization in soils namely (1) selective preservation of recalcitrant compounds, (2) spatial inaccessibility to decomposer organisms, and (3) interactions of OM with minerals and metal ions. The model concept relates the diverse stabilization mechanisms to active, intermediate, and passive pools. The formation of the passive pool is regarded as hierarchical structured co‐action of various processes that are active under specific pedogenetic conditions. To evaluate the model, we used data of pool sizes and turnover times of soil OM fractions from horizons of two acid forest and two agricultural soils. Selective preservation of recalcitrant compounds is relevant in the active pool and particularly in soil horizons with high C contents. Biogenic aggregation preserves OM in the intermediate pool and is limited to topsoil horizons. Spatial inaccessibility due to the occlusion of OM in clay microstructures and due to the formation of hydrophobic surfaces stabilizes OM in the passive pool. If present, charcoal contributes to the passive pool mainly in topsoil horizons. The importance of organo‐mineral interactions for OM stabilization in the passive pool is well‐known and increases with soil depth. Hydrophobicity is particularly relevant in acid soils and in soils with considerable inputs of charcoal. We conclude that the stabilization potentials of soils are site‐ and horizon‐specific. Furthermore, management affects key stabilization mechanisms. Tillage increases the importance of organo‐mineral interactions for OM stabilization, and in Ap horizons with high microbial activity and C turnover, organo‐mineral interactions can contribute to OM stabilization in the intermediate pool. The application of our model showed that we need a better understanding of processes causing spatial inaccessibility of OM to decomposers in the passive pool.